DeCypher
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  bioinformatics and text mining solutions

Section Topics:

Introduction
SeqCruncher Accelerator
Tera-BLAST
Tera-Probe
GeneDetective
HMM Solution
Smith-Waterman
Algorithms
Interfaces
Configurations
Published Citations

News:

Invitrogen and Active Motif explore use of FPGA for Next-Generation Sequencing Data Analysis

SeqCruncher™ improves DeCypher and CodeQuest throughput by 3-20X

TimeLogic welcomes new customers at NIEHS, Hiram College and the Korea National Institutes of Health

DeCypher 7.6.2 software update improves HMM analysis, output formatting

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High-Performance Enterprise Biocomputing Solutions

The DeCypher® enterprise biocomputing solutions combine proven bioinformatics applications with high throughput accelerator hardware to achieve an ideal blend of accuracy, performance and value.

Life science institutions worldwide have chosen DeCypher as their optimal solution for high throuhgput bioinformatics. So whether you rely on Tera-BLAST and Smith-Waterman for genome annotation and SNP mapping, employ Hidden Markov Model Analysis for protein classification, or build gene models to study alternative splicing, DeCypher brings you results faster.

New! DeCypher MiniCluster

  • The new DeCypher MiniCluster includes all algorithm modules and SeqCruncher hardware preinstalled across 2 or 3 Dell 2950 servers (featuring dual CPUs with 4 cores each). It brings plug-and-play convenience and exceptional performance to your bioinformatics server room.

  • Minimized hassle and cluster expenses - DeCypher MiniCluster contains all required servers, CPUs, disks, RAM and network connectivity for reliable bioinformatics performance.

  • Built-in Autoclustering - The DeCypher MiniCluster head node automatically updates target databases across the slaves, and manages job submissions across all nodes.

  • Up to thousands of CPUs of performance for genomics in 6 inches of rack space! Request a quotation or performance benchmark for your DeCypher MiniCluster today!

  • Need to scale beyond 3 servers? Migrate your Mini-Cluster to a DeCypher Enterprise Solutions for up to 15 nodes of genomics processing throughput

Multi-Node DeCypher Enterprise Systems

  • DeCypher Enterprise Solutions offer the greatest installation flexibility and expandability. Your enterprise system can be configured with the specific algorithm modules that address your immediate computing burdens and the DeCypher Engine hardware for your Linux, Solaris, or Windows server(s).

  • Each enterprise system node can be configured with a preference rating for specific search types. In a mixed environment where servers have between 1-3 cards, you may want to reserve the multi-card systems for dynamic programming searches (Smith-Waterman, HMM).

    DeCypher Enterprise systems range from a single server with 1 algorithm module to include 20+ DeCypher Engines across 10 servers. This is a great way to leverage the servers you have in house.

    Request a DeCypher Enterprise system quotation today!

On-site installation and training by bioinformatics professionals helps users and integrators rapidly adopt DeCypher as the cornerstone of your genomics computing infrastructure.

For immediate answers to your DeCypher questions, contact us today!

 

TimeLogic is a brand of Active Motif, Inc. All text © 2008